Temperature and Activity
| Temperature | Activity |
|---|---|
Brownian thermostat set to some \(T\) |
Brownian thermostat set to \(T=1\) |
Thermostat keeps \(T\) fixed |
Activity raises temperature due to energy input |
Temperature and Activity
Temperature and Activity
Temperature and Activity
Temperature and Activity
Use a Harmonic Potential
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The current repulsive Lennard-Jones may be too similar to hard-spheres, and may be unaffected by \(20 k_B T\) "jolts"
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A softer potential may provide lower "barriers" that can be jumped with a \(20 k_B T\) "jolt"
Nucleoid Density
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Units of "Nucleoid Density" are not given
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I can simulate using varied constant factors
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Code mostly written, no simulations run yet